BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F05SP1|AL427648
(1035 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1448 671 0.0
>3x_Contig1448
Length = 10333
Score = 671 bits (337), Expect = 0.0
Identities = 402/414 (97%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 624 agcaaaatttgggtccgaaattgcagtgttttcaatcaccggataaatagcaaaaagttc 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agcaaaatttgggtccgaaattgcagtgttttcaatcaccggataaatagcaaaaagttc 71
Query: 684 actgtaaagaggaaaaatgcttagatgaaaaagaaagcaccgcatcaatagtttgtgcga 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 actgtaaagaggaaaaatgcttagatgaaaaagaaagcaccgcatcaatagtttgtgcga 131
Query: 744 tataataatgggaaatggaccacaacggtccgaggttttggctcgagcggatttcttctg 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tataataatgggaaatggaccacaacggtccgaggttttggctcgagcggatttcttctg 191
Query: 804 cgggaagtttgggttgtagt-gaagacgagtaaaaccagtaatatcctgttatttgaaaa 862
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 192 cgggaagtttgggttgtagtagaagacgagt-aaaccagtaatatcctgttatttgaaaa 250
Query: 863 ctttatatatgcatttttaataatagagaatgatataggaagctaaaaaggcagtagttg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ctttatatatgcatttttaataatagagaatgatataggaagctaaaaaggcagtagttg 310
Query: 923 ttgctggcttagtacaatct--gtaagctggacccatggtagacttgatga-cmaggaac 979
|||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||
Sbjct: 311 ttgctggcttagtacaatcttgttaagctggacccatggtagacttgatgaccaaggaac 370
Query: 980 cgacgttttg-cagttcttcttc-acaagggga-caagaag-taacagacatca 1029
|||||||||| |||||||||||| |||||| || ||||||| ||||||||||||
Sbjct: 371 cgacgttttgccagttcttcttcaacaaggagaccaagaagttaacagacatca 424
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8098
Number of Sequences: 1807
Number of extensions: 8098
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 1035
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1019
effective length of database: 10,329,639
effective search space: 10525902141
effective search space used: 10525902141
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)